Loop HL_7NFX

3D structure

PDB id: 7NFX (explore in PDB, NAKB, or RNA 3D Hub)
Description: Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.2 Å

Loop

Sequence: CAGUCGAGAGUGGACGGGAGCCCGCCCCCGGAGCCCCGCGGACGCUACG
Length: 49 nucleotides
Bulged bases: 7NFX|1|5|G|2089, 7NFX|1|5|G|2094, 7NFX|1|5|C|2248, 7NFX|1|5|C|2249, 7NFX|1|5|G|2254, 7NFX|1|5|C|2256, 7NFX|1|5|G|2259, 7NFX|1|5|G|2262, 7NFX|1|5|U|2267, 7NFX|1|5|C|2269
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7NFX|1|5|C|2087
7NFX|1|5|A|2088
7NFX|1|5|G|2089
7NFX|1|5|U|2090
7NFX|1|5|C|2091
7NFX|1|5|G|2092
7NFX|1|5|A|2093
7NFX|1|5|G|2094
7NFX|1|5|A|2095
7NFX|1|5|G|2096
7NFX|1|5|U|2097
7NFX|1|5|G|2098
7NFX|1|5|G|2099
7NFX|1|5|A|2100
7NFX|1|5|C|2101
7NFX|1|5|G|2102
7NFX|1|5|G|2103
7NFX|1|5|G|2104
7NFX|1|5|A|2105
7NFX|1|5|G|2106
7NFX|1|5|C|2107
7NFX|1|5|C|2243
7NFX|1|5|C|2244
7NFX|1|5|G|2245
7NFX|1|5|C|2246
7NFX|1|5|C|2247
7NFX|1|5|C|2248
7NFX|1|5|C|2249
7NFX|1|5|C|2250
7NFX|1|5|G|2251
7NFX|1|5|G|2252
7NFX|1|5|A|2253
7NFX|1|5|G|2254
7NFX|1|5|C|2255
7NFX|1|5|C|2256
7NFX|1|5|C|2257
7NFX|1|5|C|2258
7NFX|1|5|G|2259
7NFX|1|5|C|2260
7NFX|1|5|G|2261
7NFX|1|5|G|2262
7NFX|1|5|A|2263
7NFX|1|5|C|2264
7NFX|1|5|G|2265
7NFX|1|5|C|2266
7NFX|1|5|U|2267
7NFX|1|5|A|2268
7NFX|1|5|C|2269
7NFX|1|5|G|2270

Current chains

Chain 5: 28S ribosomal RNA

Nearby chains

Chain C: 60S ribosomal protein L4
Chain E: 60S ribosomal protein L6
Chain F: uL30
Chain Q: eL18
Chain r: eL28

HL_7NFX_034