HL_7NFX_045

3D structure

PDB id

7NFX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosome nascent chain complex with SRP and SRP receptor in early state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUUCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NFX_045 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.1392

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

7NFX|1|5|G|2705
7NFX|1|5|G|2706
7NFX|1|5|U|2707
7NFX|1|5|U|2708
7NFX|1|5|C|2709
7NFX|1|5|C|2710

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain R

60S RIBOSOMAL PROTEIN EL19