HL_7NHK_004

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUUUAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_004 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.3383

The information below is about HL_4WF9_004

Detailed Annotation

GNRA with tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7NHK|1|A|U|136
7NHK|1|A|U|137
7NHK|1|A|U|138
7NHK|1|A|U|139
7NHK|1|A|A|140
7NHK|1|A|U|141
7NHK|1|A|A|142
7NHK|1|A|G|143

Current chains

Chain A

23S rRNA

Nearby chains

Chain W

50S ribosomal protein L23