HL_7NHK_018

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAGAG

Length

7 nucleotides

Bulged bases

7NHK|1|A|A|651

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_018 not in the Motif Atlas

Geometric match to HL_3IGI_004

Geometric discrepancy: 0.2433

The information below is about HL_3IGI_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37569.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

7NHK|1|A|C|648
7NHK|1|A|G|649
7NHK|1|A|A|650
7NHK|1|A|A|651
7NHK|1|A|G|652
7NHK|1|A|A|653
7NHK|1|A|G|654

Current chains

Chain A

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L4