HL_7NHK_027

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_027 not in the Motif Atlas

Homologous match to HL_7A0S_027

Geometric discrepancy: 0.2005

The information below is about HL_7A0S_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7NHK|1|A|G|1017
7NHK|1|A|A|1018
7NHK|1|A|A|1019
7NHK|1|A|A|1020
7NHK|1|A|C|1021
7NHK|1|A|A|1022
7NHK|1|A|G|1023
7NHK|1|A|C|1024

Current chains

Chain A

23S rRNA

Nearby chains

Chain 2

50S ribosomal protein L30

Chain T

50S ribosomal protein L20

Chain U

50S ribosomal protein L21