HL_7NHK_035

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUUGAUAUUC

Length

10 nucleotides

Bulged bases

7NHK|1|A|U|1431, 7NHK|1|A|U|1432

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_035 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.1386

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7NHK|1|A|G|1424
7NHK|1|A|U|1425
7NHK|1|A|U|1426
7NHK|1|A|G|1427
7NHK|1|A|A|1428
7NHK|1|A|U|1429
7NHK|1|A|A|1430
7NHK|1|A|U|1431
7NHK|1|A|U|1432
7NHK|1|A|C|1433

Current chains

Chain A

23S rRNA

Nearby chains

Chain W

50S ribosomal protein L23