HL_7NHK_053
3D structure
- PDB id
- 7NHK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 7NHK|1|A|G|2263
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NHK_053 not in the Motif Atlas
- Homologous match to HL_5J7L_186
- Geometric discrepancy: 0.1135
- The information below is about HL_5J7L_186
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_85367.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7NHK|1|A|C|2261
7NHK|1|A|U|2262
7NHK|1|A|G|2263
7NHK|1|A|G|2264
7NHK|1|A|G|2265
7NHK|1|A|G|2266
7NHK|1|A|C|2267
7NHK|1|A|G|2268
7NHK|1|A|G|2269
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 0
- ABC-F type ribosomal protection protein Lsa(A)
- Chain D
- Transfer RNA; tRNA
- Chain P
- 50S ribosomal protein L16
- Chain Y
- 50S ribosomal protein L27
Coloring options: