HL_7NHK_067

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

7NHK|1|A|A|2812

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_067 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.5188

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7NHK|1|A|C|2807
7NHK|1|A|U|2808
7NHK|1|A|U|2809
7NHK|1|A|U|2810
7NHK|1|A|A|2811
7NHK|1|A|A|2812
7NHK|1|A|G|2813

Current chains

Chain A

23S rRNA

Nearby chains