HL_7NHK_099

3D structure

PDB id

7NHK (explore in PDB, NAKB, or RNA 3D Hub)

Description

LsaA, an antibiotic resistance ABCF, in complex with 70S ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGACAAA

Length

7 nucleotides

Bulged bases

7NHK|1|a|C|1194

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHK_099 not in the Motif Atlas

Homologous match to HL_5J7L_026

Geometric discrepancy: 0.2616

The information below is about HL_5J7L_026

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_93535.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7NHK|1|a|U|1191
7NHK|1|a|G|1192
7NHK|1|a|A|1193
7NHK|1|a|C|1194
7NHK|1|a|A|1195
7NHK|1|a|A|1196
7NHK|1|a|A|1197

Current chains

Chain a

16S rRNA

Nearby chains

Chain c

30S ribosomal protein S2