HL_7NHL_029

3D structure

PDB id

7NHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7NHL|1|A|A|1113, 7NHL|1|A|A|1114, 7NHL|1|A|A|1117

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHL_029 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.5751

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7NHL|1|A|C|1108
7NHL|1|A|U|1109
7NHL|1|A|U|1110
7NHL|1|A|A|1111
7NHL|1|A|G|1112
7NHL|1|A|A|1113
7NHL|1|A|A|1114
7NHL|1|A|G|1115
7NHL|1|A|C|1116
7NHL|1|A|A|1117
7NHL|1|A|G|1118

Current chains

Chain A

23S rRNA

Nearby chains