HL_7NHL_056

3D structure

PDB id

7NHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUUGGAAAUC

Length

11 nucleotides

Bulged bases

7NHL|1|A|G|2334, 7NHL|1|A|A|2336

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHL_056 not in the Motif Atlas

Homologous match to HL_4WF9_051

Geometric discrepancy: 0.5618

The information below is about HL_4WF9_051

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHL|1|A|G|2330
7NHL|1|A|G|2331
7NHL|1|A|U|2332
7NHL|1|A|U|2333
7NHL|1|A|G|2334
7NHL|1|A|G|2335
7NHL|1|A|A|2336
7NHL|1|A|A|2337
7NHL|1|A|A|2338
7NHL|1|A|U|2339
7NHL|1|A|C|2340

Current chains

Chain A

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L5