HL_7NHL_084

3D structure

PDB id

7NHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaA-LC, an antibiotic resistance ABCF, in complex with 70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7NHL|1|a|A|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHL_084 not in the Motif Atlas

Homologous match to HL_6CZR_080

Geometric discrepancy: 0.1654

The information below is about HL_6CZR_080

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

58

Unit IDs

7NHL|1|a|C|350
7NHL|1|a|U|351
7NHL|1|a|A|352
7NHL|1|a|C|353
7NHL|1|a|G|354
7NHL|1|a|G|355

Current chains

Chain a

16S rRNA

Nearby chains

Chain N

50S ribosomal protein L14

Chain S

50S ribosomal protein L19