HL_7NHM_029

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

7NHM|1|A|A|1114

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHM_029 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.3043

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7NHM|1|A|C|1108
7NHM|1|A|U|1109
7NHM|1|A|U|1110
7NHM|1|A|A|1111
7NHM|1|A|G|1112
7NHM|1|A|A|1113
7NHM|1|A|A|1114
7NHM|1|A|G|1115
7NHM|1|A|C|1116
7NHM|1|A|A|1117
7NHM|1|A|G|1118

Current chains

Chain A

23S rRNA

Nearby chains