HL_7NHM_031

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

7NHM|1|A|U|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHM_031 not in the Motif Atlas

Geometric match to HL_4LFB_005

Geometric discrepancy: 0.206

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7NHM|1|A|C|1214
7NHM|1|A|U|1215
7NHM|1|A|U|1216
7NHM|1|A|U|1217
7NHM|1|A|G|1218

Current chains

Chain A

23S rRNA

Nearby chains