HL_7NHM_051

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

7NHM|1|A|A|2057, 7NHM|1|A|A|2058, 7NHM|1|A|G|2059

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHM_051 not in the Motif Atlas

Homologous match to HL_4WF9_047

Geometric discrepancy: 0.1547

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.2

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

8

Unit IDs

7NHM|1|A|G|2054
7NHM|1|A|U|2055
7NHM|1|A|G|2056
7NHM|1|A|A|2057
7NHM|1|A|A|2058
7NHM|1|A|G|2059
7NHM|1|A|A|2060
7NHM|1|A|U|2061
7NHM|1|A|G|2062
7NHM|1|A|C|2063

Current chains

Chain A

23S rRNA

Nearby chains

Chain 5

50S ribosomal protein L32

Chain H

50S ribosomal protein L3

Chain U

50S ribosomal protein L21