HL_7NHM_068

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AAAGAUGAU

Length

9 nucleotides

Bulged bases

7NHM|1|A|A|2840

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHM_068 not in the Motif Atlas

Homologous match to HL_5J7L_201

Geometric discrepancy: 0.1224

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7NHM|1|A|A|2839
7NHM|1|A|A|2840
7NHM|1|A|A|2841
7NHM|1|A|G|2842
7NHM|1|A|A|2843
7NHM|1|A|U|2844
7NHM|1|A|G|2845
7NHM|1|A|A|2846
7NHM|1|A|U|2847

Current chains

Chain A

23S rRNA

Nearby chains

Chain H

50S ribosomal protein L3

Chain Q

50S ribosomal protein L17