HL_7NHM_073
3D structure
- PDB id
- 7NHM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NHM_073 not in the Motif Atlas
- Homologous match to HL_4TUE_034
- Geometric discrepancy: 0.1614
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
7NHM|1|D|G|32
7NHM|1|D|C|33
7NHM|1|D|U|34
7NHM|1|D|C|35
7NHM|1|D|A|36
7NHM|1|D|U|37
7NHM|1|D|A|38
7NHM|1|D|A|39
7NHM|1|D|C|40
Current chains
- Chain D
- tRNA-fMet
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- RNA (5'-R(P*GP*GP*AP*GP*GP*UP*NP*NP*NP*NP*NP*NP*AP*UP*G)-3')
- Chain j
- 30S ribosomal protein S9
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