HL_7NHM_078

3D structure

PDB id

7NHM (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome from Staphylococcus aureus

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGCAUG

Length

6 nucleotides

Bulged bases

7NHM|1|a|C|195

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHM_078 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1648

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.2

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7NHM|1|a|C|193
7NHM|1|a|G|194
7NHM|1|a|C|195
7NHM|1|a|A|196
7NHM|1|a|U|197
7NHM|1|a|G|198

Current chains

Chain a

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S17