HL_7NHN_007

3D structure

PDB id

7NHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AAAAAU

Length

6 nucleotides

Bulged bases

7NHN|1|A|A|230

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHN_007 not in the Motif Atlas

Homologous match to HL_7A0S_007

Geometric discrepancy: 0.2837

The information below is about HL_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91813.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

24

Unit IDs

7NHN|1|A|A|227
7NHN|1|A|A|228
7NHN|1|A|A|229
7NHN|1|A|A|230
7NHN|1|A|A|231
7NHN|1|A|U|232

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L15