HL_7NHN_025

3D structure

PDB id

7NHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

7NHN|1|A|U|873, 7NHN|1|A|G|876

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHN_025 not in the Motif Atlas

Homologous match to HL_5J7L_157

Geometric discrepancy: 0.1355

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

7NHN|1|A|U|872
7NHN|1|A|U|873
7NHN|1|A|U|874
7NHN|1|A|A|875
7NHN|1|A|G|876
7NHN|1|A|G|877

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L15