HL_7NHN_026

3D structure

PDB id

7NHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUCUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NHN_026 not in the Motif Atlas

Geometric match to HL_4WSB_001

Geometric discrepancy: 0.2801

The information below is about HL_4WSB_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91813.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

24

Unit IDs

7NHN|1|A|C|932
7NHN|1|A|U|933
7NHN|1|A|U|934
7NHN|1|A|C|935
7NHN|1|A|U|936
7NHN|1|A|C|937
7NHN|1|A|G|938

Current chains

Chain A

23S rRNA

Nearby chains

Chain n

30S ribosomal protein S13