HL_7NHN_047

3D structure

PDB id

7NHN (explore in PDB, NAKB, or RNA 3D Hub)

Description

VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

7NHN|1|A|A|1946, 7NHN|1|A|C|1947

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NHN|1|A|G|1943
7NHN|1|A|U|1944
7NHN|1|A|A|1945
7NHN|1|A|A|1946
7NHN|1|A|C|1947
7NHN|1|A|U|1948
7NHN|1|A|A|1949
7NHN|1|A|U|1950
7NHN|1|A|A|1951
7NHN|1|A|A|1952
7NHN|1|A|C|1953

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Transfer RNA; tRNA

Chain a

Small subunit ribosomal RNA; SSU rRNA