HL_7NHN_049
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 7NHN|1|A|A|2063, 7NHN|1|A|A|2064, 7NHN|1|A|G|2065
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NHN_049 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.12
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7NHN|1|A|G|2060
7NHN|1|A|U|2061
7NHN|1|A|G|2062
7NHN|1|A|A|2063
7NHN|1|A|A|2064
7NHN|1|A|G|2065
7NHN|1|A|A|2066
7NHN|1|A|U|2067
7NHN|1|A|G|2068
7NHN|1|A|C|2069
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- 50S ribosomal protein L32-2
- Chain H
- 50S ribosomal protein L3
- Chain U
- 50S ribosomal protein L21
Coloring options: