HL_7NHN_102
3D structure
- PDB id
- 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUCAGCAUGC
- Length
- 11 nucleotides
- Bulged bases
- 7NHN|1|a|U|1373
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NHN_102 not in the Motif Atlas
- Homologous match to HL_4LFB_030
- Geometric discrepancy: 0.1429
- The information below is about HL_4LFB_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86432.2
- Basepair signature
- cWW-tWH-tWH-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
7NHN|1|a|G|1365
7NHN|1|a|A|1366
7NHN|1|a|U|1367
7NHN|1|a|C|1368
7NHN|1|a|A|1369
7NHN|1|a|G|1370
7NHN|1|a|C|1371
7NHN|1|a|A|1372
7NHN|1|a|U|1373
7NHN|1|a|G|1374
7NHN|1|a|C|1375
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain j
- 30S ribosomal protein S9
- Chain k
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S13
- Chain o
- 30S ribosomal protein S14 type Z
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