HL_7NQH_004

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUAUAACG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_004 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.2412

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

7NQH|1|AA|C|122
7NQH|1|AA|U|123
7NQH|1|AA|A|124
7NQH|1|AA|U|125
7NQH|1|AA|A|126
7NQH|1|AA|A|127
7NQH|1|AA|C|128
7NQH|1|AA|G|129

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AO

uS15m

Chain AQ

uS17m