HL_7NQH_005

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

7NQH|1|AA|U|149, 7NQH|1|AA|A|151

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_005 not in the Motif Atlas

Geometric match to HL_5J7L_018

Geometric discrepancy: 0.2829

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

7NQH|1|AA|G|147
7NQH|1|AA|C|148
7NQH|1|AA|U|149
7NQH|1|AA|C|150
7NQH|1|AA|A|151
7NQH|1|AA|A|152
7NQH|1|AA|C|153

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AP

28S ribosomal protein S16, mitochondrial

Chain Ac

Mitochondrial ribosomal protein S25