HL_7NQH_018

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UACAUAA

Length

7 nucleotides

Bulged bases

7NQH|1|AA|A|731, 7NQH|1|AA|U|732, 7NQH|1|AA|A|733

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_018 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.1691

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7NQH|1|AA|U|728
7NQH|1|AA|A|729
7NQH|1|AA|C|730
7NQH|1|AA|A|731
7NQH|1|AA|U|732
7NQH|1|AA|A|733
7NQH|1|AA|A|734

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AG

28S ribosomal protein S7, mitochondrial

Chain AI

uS9m

Chain Ag

Death associated protein 3