HL_7NQH_034

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

7NQH|1|BA|A|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_034 not in the Motif Atlas

Homologous match to HL_7RQB_024

Geometric discrepancy: 0.2644

The information below is about HL_7RQB_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74322.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

4

Unit IDs

7NQH|1|BA|U|326
7NQH|1|BA|G|327
7NQH|1|BA|A|328
7NQH|1|BA|A|329
7NQH|1|BA|A|330
7NQH|1|BA|A|331
7NQH|1|BA|G|332

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BD

uL2m

Chain Bi

Mitochondrial ribosomal protein L45