HL_7NQH_039

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CCUAAAAGCAG

Length

11 nucleotides

Bulged bases

7NQH|1|BA|A|515

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_039 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.2232

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7NQH|1|BA|C|509
7NQH|1|BA|C|510
7NQH|1|BA|U|511
7NQH|1|BA|A|512
7NQH|1|BA|A|513
7NQH|1|BA|A|514
7NQH|1|BA|A|515
7NQH|1|BA|G|516
7NQH|1|BA|C|517
7NQH|1|BA|A|518
7NQH|1|BA|G|519

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BK

Mitochondrial ribosomal protein L11