HL_7NQH_042

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGCCUU

Length

6 nucleotides

Bulged bases

7NQH|1|BA|C|655

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_042 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3499

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

7NQH|1|BA|A|653
7NQH|1|BA|G|654
7NQH|1|BA|C|655
7NQH|1|BA|C|656
7NQH|1|BA|U|657
7NQH|1|BA|U|658

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B5

bL32m

Chain BR

bL17m

Chain Bw

39S ribosomal protein S30, mitochondrial