HL_7NQH_048

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CACCAG

Length

6 nucleotides

Bulged bases

7NQH|1|BA|C|889

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_048 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2684

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7NQH|1|BA|C|887
7NQH|1|BA|A|888
7NQH|1|BA|C|889
7NQH|1|BA|C|890
7NQH|1|BA|A|891
7NQH|1|BA|G|892

Current chains

Chain BA

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BD

uL2m