HL_7NQH_053

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUGGGGUGA

Length

9 nucleotides

Bulged bases

7NQH|1|BA|G|1150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_053 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.1144

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

7NQH|1|BA|U|1148
7NQH|1|BA|U|1149
7NQH|1|BA|G|1150
7NQH|1|BA|G|1151
7NQH|1|BA|G|1152
7NQH|1|BA|G|1153
7NQH|1|BA|U|1154
7NQH|1|BA|G|1155
7NQH|1|BA|A|1156

Current chains

Chain BA

16S rRNA

Nearby chains

Chain AV

tRNAMet

Chain B0

Mitochondrial ribosomal protein L27

Chain BL

Peptide chain release factor 1-like, mitochondrial

Chain BQ

uL16m