HL_7NQH_058

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGUUCCUAU

Length

9 nucleotides

Bulged bases

7NQH|1|BA|U|1296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_058 not in the Motif Atlas

Homologous match to HL_5J7L_193

Geometric discrepancy: 0.2187

The information below is about HL_5J7L_193

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7NQH|1|BA|A|1294
7NQH|1|BA|G|1295
7NQH|1|BA|U|1296
7NQH|1|BA|U|1297
7NQH|1|BA|C|1298
7NQH|1|BA|C|1299
7NQH|1|BA|U|1300
7NQH|1|BA|A|1301
7NQH|1|BA|U|1302

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B9

Ribosomal protein

Chain Bq

mL54