HL_7NQH_065

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUAGAACAG

Length

9 nucleotides

Bulged bases

7NQH|1|BA|U|1558

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_065 not in the Motif Atlas

Geometric match to HL_5J7L_201

Geometric discrepancy: 0.1497

The information below is about HL_5J7L_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7NQH|1|BA|C|1557
7NQH|1|BA|U|1558
7NQH|1|BA|A|1559
7NQH|1|BA|G|1560
7NQH|1|BA|A|1561
7NQH|1|BA|A|1562
7NQH|1|BA|C|1563
7NQH|1|BA|A|1564
7NQH|1|BA|G|1565

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B5

bL32m

Chain BE

ICT1

Chain BR

bL17m

Chain BT

Mitochondrial ribosomal protein L19