HL_7NQH_070

3D structure

PDB id

7NQH (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRF1a and P-site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUAAAAGA

Length

8 nucleotides

Bulged bases

7NQH|1|BA|A|274, 7NQH|1|BA|G|276

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQH_070 not in the Motif Atlas

Geometric match to HL_4WF9_071

Geometric discrepancy: 0.3885

The information below is about HL_4WF9_071

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7NQH|1|BA|U|270
7NQH|1|BA|U|271
7NQH|1|BA|A|272
7NQH|1|BA|A|273
7NQH|1|BA|A|274
7NQH|1|BA|A|275
7NQH|1|BA|G|276
7NQH|1|BA|A|277

Current chains

Chain BA

16S rRNA

Nearby chains

Chain An

Aurora kinase A interacting protein 1

Chain BD

uL2m

Chain Ba

Mitochondrial ribosomal protein L37