HL_7NQL_010

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_010 not in the Motif Atlas

Homologous match to HL_4LFB_016

Geometric discrepancy: 0.1419

The information below is about HL_4LFB_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7NQL|1|AA|C|376
7NQL|1|AA|G|377
7NQL|1|AA|A|378
7NQL|1|AA|A|379
7NQL|1|AA|A|380
7NQL|1|AA|G|381

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AO

uS15m

Chain AU

bS21m

Chain Am

mS37