HL_7NQL_028

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_028 not in the Motif Atlas

Homologous match to HL_7RQB_015

Geometric discrepancy: 0.1118

The information below is about HL_7RQB_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7NQL|1|BA|C|121
7NQL|1|BA|G|122
7NQL|1|BA|U|123
7NQL|1|BA|A|124
7NQL|1|BA|A|125
7NQL|1|BA|G|126

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B7

Mitochondrial ribosomal protein L34

Chain BF

Mitochondrial ribosomal protein L4

Chain BX

uL23m

Chain Be

Mitochondrial ribosomal protein L41

Chain Bi

Mitochondrial ribosomal protein L45