HL_7NQL_031

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAGAAC

Length

6 nucleotides

Bulged bases

7NQL|1|BA|G|222

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_031 not in the Motif Atlas

Geometric match to HL_4WF9_011

Geometric discrepancy: 0.199

The information below is about HL_4WF9_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7NQL|1|BA|G|220
7NQL|1|BA|A|221
7NQL|1|BA|G|222
7NQL|1|BA|A|223
7NQL|1|BA|A|224
7NQL|1|BA|C|225

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B8

Mitochondrial ribosomal protein L35

Chain BF

Mitochondrial ribosomal protein L4

Chain BP

uL15m

Chain Bl

Mrpl34

Chain Bn

Mitochondrial ribosomal protein L51

Chain Bv

mL64