HL_7NQL_034

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

7NQL|1|BA|A|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_034 not in the Motif Atlas

Homologous match to HL_7RQB_024

Geometric discrepancy: 0.2876

The information below is about HL_7RQB_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74322.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

4

Unit IDs

7NQL|1|BA|U|326
7NQL|1|BA|G|327
7NQL|1|BA|A|328
7NQL|1|BA|A|329
7NQL|1|BA|A|330
7NQL|1|BA|A|331
7NQL|1|BA|G|332

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BD

uL2m

Chain Bi

Mitochondrial ribosomal protein L45