HL_7NQL_039

3D structure

PDB id

7NQL (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with ICT1 and P site tRNAMet

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUAAAAGCAG

Length

11 nucleotides

Bulged bases

7NQL|1|BA|A|515

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NQL_039 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.2622

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7NQL|1|BA|C|509
7NQL|1|BA|C|510
7NQL|1|BA|U|511
7NQL|1|BA|A|512
7NQL|1|BA|A|513
7NQL|1|BA|A|514
7NQL|1|BA|A|515
7NQL|1|BA|G|516
7NQL|1|BA|C|517
7NQL|1|BA|A|518
7NQL|1|BA|G|519

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BK

Mitochondrial ribosomal protein L11

Chain BQ

uL16m