HL_7NRC_079
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CAAUUUAUACAG
- Length
- 12 nucleotides
- Bulged bases
- 7NRC|1|S2|U|74, 7NRC|1|S2|U|75, 7NRC|1|S2|U|77
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NRC_079 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.11
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7NRC|1|S2|C|70
7NRC|1|S2|A|71
7NRC|1|S2|A|72
7NRC|1|S2|U|73
7NRC|1|S2|U|74
7NRC|1|S2|U|75
7NRC|1|S2|A|76
7NRC|1|S2|U|77
7NRC|1|S2|A|78
7NRC|1|S2|C|79
7NRC|1|S2|A|80
7NRC|1|S2|G|81
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain ST
- 40S ribosomal protein S6-A
Coloring options: