HL_7NRC_084

3D structure

PDB id

7NRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

7NRC|1|S2|U|277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NRC_084 not in the Motif Atlas

Geometric match to HL_4WF9_037

Geometric discrepancy: 0.2598

The information below is about HL_4WF9_037

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7NRC|1|S2|C|276
7NRC|1|S2|U|277
7NRC|1|S2|U|278
7NRC|1|S2|G|279

Current chains

Chain S2

18S rRNA (1771-MER)

Nearby chains