HL_7NRC_103
3D structure
- PDB id
- 7NRC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the yeast Gcn1 bound to a leading stalled 80S ribosome with Rbg2, Gir2, A- and P-tRNA and eIF5A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7NRC_103 not in the Motif Atlas
- Homologous match to HL_4V88_211
- Geometric discrepancy: 0.0825
- The information below is about HL_4V88_211
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7NRC|1|S2|C|1121
7NRC|1|S2|G|1122
7NRC|1|S2|C|1123
7NRC|1|S2|A|1124
7NRC|1|S2|A|1125
7NRC|1|S2|G|1126
Current chains
- Chain S2
- 18S rRNA (1771-MER)
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain Lp
- 60S ribosomal protein L41-A
- Chain Lr
- 60S ribosomal protein L43-A
Coloring options: