HL_7NSI_010

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_010 not in the Motif Atlas

Homologous match to HL_4LFB_016

Geometric discrepancy: 0.1549

The information below is about HL_4LFB_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7NSI|1|AA|C|376
7NSI|1|AA|G|377
7NSI|1|AA|A|378
7NSI|1|AA|A|379
7NSI|1|AA|A|380
7NSI|1|AA|G|381

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AO

28S ribosomal protein S15, mitochondrial

Chain AU

28S ribosomal protein S21, mitochondrial

Chain Am

Coiled-coil-helix-coiled-coil-helix domain containing 1