HL_7NSI_018

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UACAUAA

Length

7 nucleotides

Bulged bases

7NSI|1|AA|A|733

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_018 not in the Motif Atlas

Geometric match to HL_5NFV_001

Geometric discrepancy: 0.2795

The information below is about HL_5NFV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69752.4

Basepair signature

cWW-F

Number of instances in this motif group

7

Unit IDs

7NSI|1|AA|U|728
7NSI|1|AA|A|729
7NSI|1|AA|C|730
7NSI|1|AA|A|731
7NSI|1|AA|U|732
7NSI|1|AA|A|733
7NSI|1|AA|A|734

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AG

28S ribosomal protein S7, mitochondrial

Chain AI

28S ribosomal protein S9, mitochondrial

Chain Ag

Death associated protein 3