HL_7NSI_022

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UGGAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_022 not in the Motif Atlas

Homologous match to HL_4LFB_032

Geometric discrepancy: 0.1053

The information below is about HL_4LFB_032

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7NSI|1|AA|U|941
7NSI|1|AA|G|942
7NSI|1|AA|G|943
7NSI|1|AA|A|944
7NSI|1|AA|A|945
7NSI|1|AA|A|946

Current chains

Chain AA

12S rRNA

Nearby chains

Chain An

Aurora kinase A interacting protein 1

Chain BA

Large subunit ribosomal RNA; LSU rRNA