HL_7NSI_025

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_025 not in the Motif Atlas

Homologous match to HL_7RQB_015

Geometric discrepancy: 0.1509

The information below is about HL_7RQB_015

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7NSI|1|BA|C|121
7NSI|1|BA|G|122
7NSI|1|BA|U|123
7NSI|1|BA|A|124
7NSI|1|BA|A|125
7NSI|1|BA|G|126

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B7

39S ribosomal protein L34, mitochondrial

Chain BF

Mitochondrial ribosomal protein L4

Chain Be

Mitochondrial ribosomal protein L41

Chain Bi

Mitochondrial ribosomal protein L45