HL_7NSI_036

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CCUAAAAGCAG

Length

11 nucleotides

Bulged bases

7NSI|1|BA|A|515

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_036 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.2646

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7NSI|1|BA|C|509
7NSI|1|BA|C|510
7NSI|1|BA|U|511
7NSI|1|BA|A|512
7NSI|1|BA|A|513
7NSI|1|BA|A|514
7NSI|1|BA|A|515
7NSI|1|BA|G|516
7NSI|1|BA|C|517
7NSI|1|BA|A|518
7NSI|1|BA|G|519

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BK

39S ribosomal protein L11, mitochondrial isoform a