HL_7NSI_039

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

AGCCUU

Length

6 nucleotides

Bulged bases

7NSI|1|BA|C|655

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_039 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2464

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7NSI|1|BA|A|653
7NSI|1|BA|G|654
7NSI|1|BA|C|655
7NSI|1|BA|C|656
7NSI|1|BA|U|657
7NSI|1|BA|U|658

Current chains

Chain BA

16S rRNA

Nearby chains

Chain B5

bL32m

Chain BR

39S ribosomal protein L17, mitochondrial

Chain Bw

39S ribosomal protein S30, mitochondrial