HL_7NSI_045

3D structure

PDB id

7NSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

CACCAG

Length

6 nucleotides

Bulged bases

7NSI|1|BA|C|889

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7NSI_045 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3286

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7NSI|1|BA|C|887
7NSI|1|BA|A|888
7NSI|1|BA|C|889
7NSI|1|BA|C|890
7NSI|1|BA|A|891
7NSI|1|BA|G|892

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BD

Ribosomal_L2_C domain-containing protein